Publications
3 granted U.S. patents and 1 pending application, and 16 papers: 9 in journals, 6 in proceedings and 1 preprint. Citation counts are on Google Scholar; the full record is on dblp.
Patents
Systems and methods for artificial facial image generation conditioned on demographic information
Granted April 2025 · Pending in Europe, Australia and Canada · with D. Shin, J. D. Hoye, M. R. Ehlers
Scenario-based cyber network topology generation system and method
Filed January 2026, pending · with J. D. Hoye, N. Melgar
Papers
2021
Identifying Current Juul Users among Emerging Adults through Twitter Feeds
T. Tran, M. Ickes, J. W. Hester, and R. Kavuluru · International Journal of Medical Informatics, 2021
BibTeX · tran2020identifying@article{tran2020identifying, title = {{Identifying Current Juul Users among Emerging Adults through Twitter Feeds}}, author = {T. Tran and M. Ickes and J. W. Hester and R. Kavuluru}, journal = {International Journal of Medical Informatics}, year = {2021}, volume = {146}, pages = {104350}, doi = {10.1016/j.ijmedinf.2020.104350}}
Attention-Gated Graph Convolutions for Extracting Drug Interaction Information from Drug Labels
T. Tran, R. Kavuluru, and H. Kilicoglu · ACM Transactions on Computing for Healthcare, 2021
BibTeX · tran2020attention@article{tran2020attention, title = {{Attention-Gated Graph Convolutions for Extracting Drug Interaction Information from Drug Labels}}, author = {T. Tran and R. Kavuluru and H. Kilicoglu}, journal = {ACM Transactions on Computing for Healthcare}, year = {2021}, doi = {10.1145/3423209}}
2020
2019
Distant Supervision for Treatment Relation Extraction by Leveraging MeSH Subheadings
T. Tran and R. Kavuluru · Artificial Intelligence in Medicine, 2019
BibTeX · tran2019distant@article{tran2019distant, title = {{Distant Supervision for Treatment Relation Extraction by Leveraging MeSH Subheadings}}, author = {T. Tran and R. Kavuluru}, journal = {Artificial Intelligence in Medicine}, year = {2019}, doi = {10.1016/j.artmed.2019.06.002}}
Confirm or Refute?: A Comparative Study on Citation Sentiment Classification in Clinical Research Publications
H. Kilicoglu, Z. Peng, S. Tafreshi, T. Tran, G. Rosemblat, and J. Schneider · Journal of Biomedical Informatics, 2019
BibTeX · kilicoglu2019confirm@article{kilicoglu2019confirm, title = {{Confirm or Refute?: A Comparative Study on Citation Sentiment Classification in Clinical Research Publications}}, author = {H. Kilicoglu and Z. Peng and S. Tafreshi and T. Tran and G. Rosemblat and J. Schneider}, journal = {Journal of Biomedical Informatics}, year = {2019}, doi = {10.1016/j.jbi.2019.103123}}
Overview of the BioCreative VI Precision Medicine Track: Mining Protein Interactions and Mutations for Precision Medicine
R. Doğan, S. Kim, A. Chatr-aryamontri, C. Wei, D. Comeau, and 22 others, including T. Tran · Database: The Journal of Biological Databases and Curation, 2019
BibTeX · dogan2019overview@article{dogan2019overview, title = {{Overview of the BioCreative VI Precision Medicine Track: Mining Protein Interactions and Mutations for Precision Medicine}}, author = {R. Doğan and S. Kim and A. Chatr-aryamontri and C. Wei and D. Comeau and others}, journal = {Database: The Journal of Biological Databases and Curation}, year = {2019}, doi = {10.1093/database/bay147}}
Neural Metric Learning for Fast End-to-End Relation Extraction
T. Tran and R. Kavuluru · arXiv preprint arXiv:1905.07458, 2019
BibTeX · tran2020neural@misc{tran2020neural, title = {{Neural Metric Learning for Fast End-to-End Relation Extraction}}, author = {T. Tran and R. Kavuluru}, howpublished = {arXiv preprint arXiv:1905.07458}, year = {2019}, url = {https://arxiv.org/pdf/1905.07458.pdf}}
2018
A Multi-Task Learning Framework for Extracting Drugs and Their Interactions from Drug Labels
T. Tran, R. Kavuluru, and H. Kilicoglu · Proceedings of the Eleventh Text Analysis Conference (TAC 2018), 2018
BibTeX · tran2018multi@inproceedings{tran2018multi, title = {{A Multi-Task Learning Framework for Extracting Drugs and Their Interactions from Drug Labels}}, author = {T. Tran and R. Kavuluru and H. Kilicoglu}, booktitle = {Proceedings of the Eleventh Text Analysis Conference (TAC 2018)}, year = {2018}, url = {https://tac.nist.gov/publications/2018/participant.papers/TAC2018.ttran.proceedings.pdf}}
Data and Systems for Medication-Related Text Classification and Concept Normalization from Twitter: Insights from the Social Media Mining for Health (SMM4H) 2017 Shared Task
A. Sarker, M. Belousov, J. Friedrichs, K. Hakala, S. Kiritchenko, F. Mehryary, S. Han, T. Tran, and 8 others · Journal of the American Medical Informatics Association, 2018
BibTeX · sarker2018data@article{sarker2018data, title = {{Data and Systems for Medication-Related Text Classification and Concept Normalization from Twitter: Insights from the Social Media Mining for Health (SMM4H) 2017 Shared Task}}, author = {A. Sarker and M. Belousov and J. Friedrichs and K. Hakala and S. Kiritchenko and F. Mehryary and S. Han and T. Tran and others}, journal = {Journal of the American Medical Informatics Association}, year = {2018}, volume = {25}, number = {10}, pages = {1274--1283}, doi = {10.1093/jamia/ocy114}}
An End-to-End Deep Learning Architecture for Extracting Protein–Protein Interactions Affected by Genetic Mutations
T. Tran and R. Kavuluru · Database: The Journal of Biological Databases and Curation, 2018
BibTeX · tran2018end@article{tran2018end, title = {{An End-to-End Deep Learning Architecture for Extracting Protein–Protein Interactions Affected by Genetic Mutations}}, author = {T. Tran and R. Kavuluru}, journal = {Database: The Journal of Biological Databases and Curation}, year = {2018}, doi = {10.1093/database/bay092}}
Predicting Psychological Health from Childhood Essays with Convolutional Neural Networks for the CLPsych 2018 Shared Task (Team UKNLP)
A. Rios, T. Tran, and R. Kavuluru · Proceedings of the Fifth Workshop on Computational Linguistics and Clinical Psychology (CLPsych 2018), 2018
BibTeX · rios2018predicting@inproceedings{rios2018predicting, title = {{Predicting Psychological Health from Childhood Essays with Convolutional Neural Networks for the CLPsych 2018 Shared Task (Team UKNLP)}}, author = {A. Rios and T. Tran and R. Kavuluru}, booktitle = {Proceedings of the Fifth Workshop on Computational Linguistics and Clinical Psychology (CLPsych 2018)}, year = {2018}, url = {https://aclanthology.org/W18-0611/}}
2017
Supervised Approaches to Assign Cooperative Patent Classification (CPC) Codes to Patents
T. Tran and R. Kavuluru · Proceedings of the Fifth International Conference on Mining Intelligence and Knowledge Exploration (MIKE 2017), 2017
BibTeX · tran2017supervised@inproceedings{tran2017supervised, title = {{Supervised Approaches to Assign Cooperative Patent Classification (CPC) Codes to Patents}}, author = {T. Tran and R. Kavuluru}, booktitle = {Proceedings of the Fifth International Conference on Mining Intelligence and Knowledge Exploration (MIKE 2017)}, year = {2017}, pages = {22--34}, publisher = {Springer}, doi = {10.1007/978-3-319-71928-3_3}}
Exploring a Deep Learning Pipeline for the BioCreative VI Precision Medicine Task
T. Tran and R. Kavuluru · Proceedings of the BioCreative VI Workshop (BC VI), 2017
BibTeX · tran2017exploring@inproceedings{tran2017exploring, title = {{Exploring a Deep Learning Pipeline for the BioCreative VI Precision Medicine Task}}, author = {T. Tran and R. Kavuluru}, booktitle = {Proceedings of the BioCreative VI Workshop (BC VI)}, year = {2017}, url = {http://protocols.netlab.uky.edu/~rvkavu2/research/tran-biocreative.pdf}}
Team UKNLP: Detecting ADRs, Classifying Medication Intake Messages, and Normalizing ADR Mentions on Twitter
S. Han, T. Tran, A. Rios, and R. Kavuluru · Proceedings of the 2nd Social Media Mining for Health Applications Workshop and Shared Task at AMIA (SMM4H 2017), 2017
BibTeX · han2017team@inproceedings{han2017team, title = {{Team UKNLP: Detecting ADRs, Classifying Medication Intake Messages, and Normalizing ADR Mentions on Twitter}}, author = {S. Han and T. Tran and A. Rios and R. Kavuluru}, booktitle = {Proceedings of the 2nd Social Media Mining for Health Applications Workshop and Shared Task at AMIA (SMM4H 2017)}, year = {2017}, url = {https://ceur-ws.org/Vol-1996/paper9.pdf}}
Extracting Drug-Drug Interactions with Word and Character-Level Recurrent Neural Networks
R. Kavuluru, A. Rios, and T. Tran · Proceedings of the Fifth IEEE International Conference on Healthcare Informatics (ICHI 2017), Workshop on Healthcare Knowledge Discovery and Management, 2017
BibTeX · kavuluru2017extracting@inproceedings{kavuluru2017extracting, title = {{Extracting Drug-Drug Interactions with Word and Character-Level Recurrent Neural Networks}}, author = {R. Kavuluru and A. Rios and T. Tran}, booktitle = {Proceedings of the Fifth IEEE International Conference on Healthcare Informatics (ICHI 2017), Workshop on Healthcare Knowledge Discovery and Management}, year = {2017}, doi = {10.1109/ICHI.2017.15}}
Predicting Mental Conditions Based on “History of Present Illness” in Psychiatric Notes with Deep Neural Networks
T. Tran and R. Kavuluru · Journal of Biomedical Informatics, 2017
BibTeX · tran2017predicting@article{tran2017predicting, title = {{Predicting Mental Conditions Based on "History of Present Illness" in Psychiatric Notes with Deep Neural Networks}}, author = {T. Tran and R. Kavuluru}, journal = {Journal of Biomedical Informatics}, year = {2017}, doi = {10.1016/j.jbi.2017.06.010}}